Accelerating the pace of engineering and science

SimBiology

Noncompartmental Analysis

Noncompartmental Analysis

Handle sparse sampling in addition to serial sampling​

Diagram View

Diagram View

Configure block properties in place with graphical context menus

Diagram View

Diagram View

Access model information directly from the graphical view

Model Usages

Model Usages

Determine model component usage from the command line using findUnusedComponents and findUsages functions

Progress Plot for Fitting

Progress Plot for Fitting

Visualize parameter estimation progress in real time for both desktop and cluster simulations

Model Selection Information

Model Selection Information

Report parameter estimation quality measures (log-likelihood, AIC, BIC) consistently across all estimation algorithms, allowing direct comparisons between model parameterizations

Steady States

Steady States

Compute model steady states using the sbiosteadystate function, for example to equilibrate a model prior to dosing

SBML Support

SBML Support

Load and save the most recent SBML file format (level 3 version 1)

Model Examples

Model Examples

Open SimBiology model examples hosted on the MATLAB Central File Exchange from within the SimBiology desktop

Block Property Editor

Block Property Editor

Display and edit block properties with a single click

Latest Releases

R2016b (Version 5.5) - 14 Sep 2016

Version 5.5, part of Release 2016b, includes the following enhancements:

  • Noncompartmental Analysis: Handle sparse sampling in addition to serial sampling​
  • Diagram View: Configure block properties in place with graphical context menus
  • Diagram View: Access model information directly from the graphical view
  • Model Usages: Determine model component usage from the command line using findUnusedComponents and findUsages functions

See the Release Notes for details.

R2016a (Version 5.4) - 3 Mar 2016

Version 5.4, part of Release 2016a, includes the following enhancements:

  • Progress Plot for Fitting: Visualize parameter estimation progress in real time for both desktop and cluster simulations
  • Model Selection Information: Report parameter estimation quality measures (log-likelihood, AIC, BIC) consistently across all estimation algorithms, allowing direct comparisons between model parameterizations
  • Steady States: Compute model steady states using the sbiosteadystate function, for example to equilibrate a model prior to dosing
  • SBML Support: Load and save the most recent SBML file format (level 3 version 1)
  • Model Examples: Open SimBiology model examples hosted on the MATLAB Central File Exchange from within the SimBiology desktop
  • Block Property Editor: Display and edit block properties with a single click

See the Release Notes for details.

R2015b (Version 5.3) - 3 Sep 2015

Version 5.3, part of Release 2015b, includes the following enhancements:

  • Application builder for model distribution and simulation​
  • Equations view of models
  • Viewing and editing reaction rates in the diagram view
  • Bioavailability example

See the Release Notes for details.

R2015a (Version 5.2) - 5 Mar 2015

Version 5.2, part of Release 2015a, includes the following enhancements:

  • Graphical representation of all modeling constructs
  • High-accuracy parameter sensitivities enabling more robust parameter optimization
  • Response-specific error models
  • Sensitivity analysis using the SimFunction object

See the Release Notes for details.

R2014b (Version 5.1) - 2 Oct 2014

Version 5.1, part of Release 2014b, includes the following enhancements:

  • Estimation of category-specific parameters using the sbiofit function
  • Parameter bounds in the sbiofit function
  • Desktop enhancements for estimation methods
  • Species, parameter, and compartment names accepted by the StatesToLog property

See the Release Notes for details.