Volume Segmenter

Segment 3-D grayscale or RGB volumetric images

Description

The app can be used to create and refine a binary or semantic segmentation mask for a 3-D grayscale or an RGB image using automated, semi-automated, and manual techniques.

Open the Volume Segmenter App

MATLAB^® Toolstrip: Open the Apps tab, under Image Processing and Computer Vision, click the Volume Segmenter app icon.
MATLAB command prompt: Enter volumeSegmenter.

Examples

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Load Volume and Labeled Volume into the Volume Segmenter

Load a volume into the workspace.

load(fullfile(toolboxdir('images'),'imdata','BrainMRILabeled','images','vol_001.mat'));

Load the corresponding labeled volume into the workspace.

load(fullfile(toolboxdir('images'),'imdata','BrainMRILabeled','labels','label_001.mat'));

Open the Volume Segmenter specifying both the volume and the labeled volume.
```
volumeSegmenter(vol,label)
```

Related Examples

Programmatic Use

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`volumeSegmenter`

volumeSegmenter opens a volume segmentation app.

`volumeSegmenter(V)`

volumeSegmenter(V) opens the Volume Segmenter app, loading the volume V into the app. Volume V is a scalar valued m-by-n-by-p or m-by-n-by-p-by-3 image of class uint8, uint16, uint32, int8, int16, int32, single, or double.

`volumeSegmenter(V,L)`

volumeSegmenter(V,L) opens the Volume Segmenter app, loading the volume V and the labeled volume L into the app. The labeled volume L is a scalar valued m-by-n-by-p image of class logical, categorical, uint8, uint16, uint32, int8, int16, int32, single, or double.

`volumeSegmenter(___,'Show3DDisplay',TF)`

volumeSegmenter(___,'Show3DDisplay',TF) logical value that specifies whether the Volume Segmenter includes a visualization of the 3-D volume in the app. The default value is true. However, the default is false on platforms where 3-D display is not supported, such as, Linux platforms, or on Windows platforms that use software versions of OpenGL.