Community Profile

Dr. Soumya Banerjee

Harvard University

Last seen: 10 mois il y a | Actif depuis 2011

Followers: 0 Following: 0

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https://sites.google.com/site/neelsoumya/ Professional Interests: Biocomputing, machine learning, bioinformatics, complex systems, mathematical modelling, big data, computational biology, biologically inspired computing, complex systems

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A soumis

Samples from gamma and Wishart
Test and draw samples from a gamma distribution and a Wishart distribution

plus de 5 ans il y a | 1 téléchargement |

A soumis

Generic function to perform logistic regression using elastic net regularization
Generic function to perform logistic regression using elastic net regularization

environ 6 ans il y a | 1 téléchargement |

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Example MATLAB script to plot ROC curve for different classification algorithms
Example MATLAB script to plot ROC curve and compute AUC for 4 different classification algorithms

plus de 6 ans il y a | 4 téléchargements |

A soumis

A generic function that uses a Generalized Linear Model (GLM) with factors
A generic function that uses a Generalized Linear Model (GLM) with factors

plus de 6 ans il y a | 1 téléchargement |

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Function to compute Fisher's p-value for meta-analysis
Function to compute Fisher's p-value for meta-analysis.

plus de 6 ans il y a | 5 téléchargements |

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Generic function and example code for using neural networks
Generic function and example code for using neural networks for prediction.

plus de 6 ans il y a | 3 téléchargements |

A soumis

Generic example code and generic function for random forests
example code and generic function for random forests (checks out of bag errors and leaf size)

presque 7 ans il y a | 4 téléchargements |

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Simple example and generic function for SVM binary classifier for general matrix
Simple generic function that takes two labelled classes and trains SVM classifier (general matrix).

presque 7 ans il y a | 1 téléchargement |

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Simple example and generic function for SVM binary classifier
Simple generic function that takes two labelled classes and trains SVM classifier.

presque 7 ans il y a | 2 téléchargements |

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Simple example code and generic function for random forests
Simple example code and generic function for random forests (checks out of bag errors)

plus de 7 ans il y a | 11 téléchargements |

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Function to plot co-ordinates from a file on a map
Code to load co-ordinate data from a file and call function to plot co-ordinates on a map.

environ 8 ans il y a | 1 téléchargement |

A soumis

Generic function and example code for performing LASSO on GLM
Generic function and example code for performing LASSO on GLM and using it for prediction

plus de 8 ans il y a | 1 téléchargement |

A soumis

Generic function for LASSO on logistic regression
Generic function and example code for LASSO on logistic regression.

plus de 8 ans il y a | 4 téléchargements |

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Simple example and generic function to perform PCA
Simple example and generic function to perform PCA(principle components analysis)

presque 9 ans il y a | 2 téléchargements |

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Example code and generic function to perform LASSO on GLM
Generic function to perform LASSO on generalized linear model (GLM).

presque 9 ans il y a | 1 téléchargement |

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Function to perform Bayesian LASSO
Function to perform Bayesian LASSO (least absolute shrinkage and selection operator)

environ 9 ans il y a | 1 téléchargement |

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Simple MATLAB example code and generic function to perform LASSO
Simple MATLAB example code and generic function to perform LASSO

plus de 9 ans il y a | 3 téléchargements |

A soumis

Bash script to compile MATLAB code in each directory
Iterative matlab compiler: this has Bash scripts to compile MATLAB code in each directory

plus de 9 ans il y a | 1 téléchargement |

A soumis

Scripts to run MATLAB on cluster using bsub
This is a set of scripts to run MATLAB in batch mode on the cluster using bsub

plus de 9 ans il y a | 2 téléchargements |

A soumis

Simple example and generic function for kmeans clustering
Simple generic function and example to perform kmeans clustering

plus de 9 ans il y a | 1 téléchargement |

A soumis

Bayesian Linear Regression
This is a set of MATLAB functions to do Bayesian linear regression

plus de 9 ans il y a | 7 téléchargements |

A soumis

Graphical User Interface for Solving Ordinary Differential Equations for In-Vitro Infection
A graphical user interface to solve a set of ordinary differential equations (in-vitro infection)

plus de 9 ans il y a | 1 téléchargement |

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Wilcoxon rank-sum test and box plots for genes/compounds etc in healthy vs. disease
Does a Wilcoxon rank-sum test and creates box plot for genes etc in healthy vs. disease individuals

plus de 9 ans il y a | 5 téléchargements |

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t-test and box plots for genes/compounds etc in healthy vs. disease
Does a t-test and creates box plots for genes/compounds in healthy vs. disease individuals

plus de 9 ans il y a | 1 téléchargement |

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healthy_disease_boxplot.zip
Box plots of measured quantity in healthy vs. disease in two cohorts

plus de 9 ans il y a | 1 téléchargement |

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Linear regression for multiple category data with different slopes for each
The function does OLS and RMA regression on data that is categorized into two different categories

presque 10 ans il y a | 2 téléchargements |

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Linear regression with statistics for multiple category data
This function does linear regression with statistics for multiple category data (OLS and RMA)

plus de 11 ans il y a | 1 téléchargement |

A soumis

A Graphical User Interface for Solving Delay Differential Equations and doing Local Search
A GUI for solving a set of delay differential equations (DDEs) and local search for best solutions

presque 12 ans il y a | 1 téléchargement |

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Graphical User Interface for Solving Ordinary Differential Equations
A Graphical User Interface for Solving Ordinary Differential Equations (Immune Response Model)

plus de 12 ans il y a | 1 téléchargement |

A soumis

Linear regression on log transformed data
A function that takes two column vectors and does linear regression on the data

plus de 12 ans il y a | 2 téléchargements |