coefCI
Confidence intervals for coefficient estimates of multinomial regression model
Since R2023a
Description
Examples
Find Confidence Intervals for Model Coefficients
Load the carbig
data set.
load carbig
The variables Horsepower
, Weight
, and Origin
contain data for car horsepower, weight, and country of origin, respectively. The variable MPG
contains car mileage data.
Create a table in which the Origin
and MPG
variables are categorical.
Origin = categorical(cellstr(Origin));
MPG = discretize(MPG,[9 19 29 39 48],"categorical");
tbl = table(Horsepower,Weight,Origin,MPG);
Fit a multinomial regression model. Specify Horsepower
, Weight
, and Origin
as predictor variables, and specify MPG
as the response variable.
modelspec = "MPG ~ 1 + Horsepower + Weight + Origin";
mdl = fitmnr(tbl,modelspec);
Find the 95% confidence intervals for the coefficients. Display the coefficient names and confidence intervals in a table by using the array2table
function.
ci = coefCI(mdl); ciTable = array2table(ci, ... RowNames = mdl.Coefficients.Properties.RowNames, ... VariableNames = ["LowerLimit","UpperLimit"])
ciTable=27×2 table
LowerLimit UpperLimit
___________ __________
(Intercept_[9, 19)) -89.395 32.927
Horsepower_[9, 19) 0.14928 0.27499
Weight_[9, 19) 0.0022537 0.0069061
Origin_France_[9, 19) -54.498 69.362
Origin_Germany_[9, 19) -62.237 59.666
Origin_Italy_[9, 19) -73.457 54.35
Origin_Japan_[9, 19) -62.743 59.097
Origin_Sweden_[9, 19) -60.076 63.853
Origin_USA_[9, 19) -59.875 61.926
(Intercept_[19, 29)) -78.671 43.544
Horsepower_[19, 29) 0.12131 0.24115
Weight_[19, 29) -0.00073846 0.0033281
Origin_France_[19, 29) -49.929 73.841
Origin_Germany_[19, 29) -57.315 64.476
Origin_Italy_[19, 29) -51.881 73.071
Origin_Japan_[19, 29) -58.22 63.559
⋮
Each row contains the lower and upper limits for the 95% confidence intervals.
Specify Confidence Level
Load the carbig
data set.
load carbig
The variables Horsepower
, Weight
, and Origin
contain data for car horsepower, weight, and country of origin. The variable MPG
contains car mileage data.
Create a table in which the Origin
and MPG
variables are categorical.
Origin = categorical(cellstr(Origin));
MPG = discretize(MPG,[9 19 29 39 48],"categorical");
tbl = table(Horsepower,Weight,Origin,MPG);
Fit a multinomial regression model. Specify Horsepower
, Weight
, and Origin
as predictor variables, and specify MPG
as the response variable.
modelspec = "MPG ~ 1 + Horsepower + Weight + Origin";
mdl = fitmnr(tbl,modelspec);
Find the 95% and 99% confidence intervals for the coefficients. Display the coefficient names and confidence intervals in a table by using the array2table
function.
ci95 = coefCI(mdl); ci99 = coefCI(mdl,0.01); confIntervals = array2table([ci95 ci99], ... RowNames=mdl.Coefficients.Properties.RowNames, ... VariableNames=["95LowerLimit","95UpperLimit", ... "99LowerLimit","99UpperLimit"])
confIntervals=27×4 table
95LowerLimit 95UpperLimit 99LowerLimit 99UpperLimit
____________ ____________ ____________ ____________
(Intercept_[9, 19)) -89.395 32.927 -108.66 52.194
Horsepower_[9, 19) 0.14928 0.27499 0.12948 0.29478
Weight_[9, 19) 0.0022537 0.0069061 0.0015209 0.0076389
Origin_France_[9, 19) -54.498 69.362 -74.007 88.871
Origin_Germany_[9, 19) -62.237 59.666 -81.438 78.868
Origin_Italy_[9, 19) -73.457 54.35 -93.588 74.481
Origin_Japan_[9, 19) -62.743 59.097 -81.935 78.288
Origin_Sweden_[9, 19) -60.076 63.853 -79.596 83.373
Origin_USA_[9, 19) -59.875 61.926 -79.06 81.111
(Intercept_[19, 29)) -78.671 43.544 -97.921 62.794
Horsepower_[19, 29) 0.12131 0.24115 0.10243 0.26003
Weight_[19, 29) -0.00073846 0.0033281 -0.001379 0.0039687
Origin_France_[19, 29) -49.929 73.841 -69.424 93.336
Origin_Germany_[19, 29) -57.315 64.476 -76.498 83.659
Origin_Italy_[19, 29) -51.881 73.071 -71.563 92.752
Origin_Japan_[19, 29) -58.22 63.559 -77.401 82.74
⋮
Each row contains the lower and upper limits for the 95% and 99% confidence intervals.
Visualize the confidence intervals by plotting their limits with the coefficient values.
ci95 = coefCI(mdl); ci99 = coefCI(mdl,0.01); colors = lines(3); hold on p = plot(mdl.Coefficients.Value,Color=colors(1,:)); plot(ci95(:,1),Color=colors(2,:),LineStyle="--") plot(ci95(:,2),Color=colors(2,:),LineStyle="--") plot(ci99(:,1),Color=colors(3,:),LineStyle="--") plot(ci99(:,2),Color=colors(3,:),LineStyle="--") hold off legend(["Coefficients","95% CI","","99% CI",""], ... Location="southeast")
The plot shows that the 99% confidence intervals for the coefficients are wider than the 95% confidence intervals.
Input Arguments
mdl
— Multinomial regression model object
MultinomialRegression
model object
Multinomial regression model object, specified as a MultinomialRegression
model object created with the fitmnr
function.
alpha
— Significance level
0.05
(default) | numeric value in the range [0,1]
Significance level for the confidence interval, specified as a numeric value in the
range [0,1]. The confidence level of ci
is equal to 100(1
– alpha)
%. alpha
is the probability that the confidence
interval does not contain the true value.
Example: 0.01
Data Types: single
| double
Output Arguments
ci
— Confidence intervals
numeric matrix
Confidence intervals, returned as a p-by-2 numeric matrix, where
p is the number of coefficients. The jth row of
ci
is the confidence interval for the jth
coefficient of mdl
. The name of coefficient j is
stored in the CoefficientNames
property of
mdl
.
More About
Confidence Intervals
The coefficient confidence intervals provide a measure of precision for regression coefficient estimates.
A 100(1 – α)% confidence interval gives the range for the corresponding regression coefficient with 100(1 – α)% confidence, meaning that 100(1 – α)% of the intervals resulting from repeated experimentation will contain the true value of the coefficient.
The software finds confidence intervals using the Wald method. The 100(1 – α)% confidence intervals for regression coefficients are
where bi is the coefficient estimate, SE(bi) is the standard error of the coefficient estimate, and t(1–α/2,n–p) is the 100(1 – α/2) percentile of the t-distribution with n – p degrees of freedom. n is the number of observations and p is the number of regression coefficients.
Version History
Introduced in R2023a
See Also
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