Hi All
this is my first question on here.
I am undertaking a project to segment 2d brain images into GM, WM and CSF using level sets, i know this is available in spm8 but i found this method interesting and wanted to create some code for it.
my problem is this: how do i strip the skull? how do i create spatial priors for GM, WM and CSF from the 30 images i have.
i have 10 axial, 10 coronal and 10 sagittal. i want 2d priors for each of them
thanks in advance for all the help!