Loading file from my directory?
1 vue (au cours des 30 derniers jours)
Afficher commentaires plus anciens
Dear I would like to download imagej-nii and also ROI (from imageJ software) and calculate the mean and std of the voxels within adjacent 5 slices (3D volume) for 6 animals. I have created code but many errors I have,,,, cause I am so beginner to use matlab.
I do not know what is the ROI format, because it is appear as text. When I search on the ImageJ website, there is no specific format for the ROI.
% for multi animal calculation.
Sabjects={'animal1', 'animal2', 'animal3','animal4', 'animal5,'animal6'};
for i =1: size(subjects,2);
image = load - nii(['\MRI\..\'subjects(i)'\roi.nii']);
for j = 0:1
region = voxel (mod = = i);
deviation (j,i+1)= std (region,[],3);
end
end
%%this is for one animal
image = load-nii ("name of the file");
roi = load-nii ("name of the file");
view-nii (roi); view-nii (image);
region1= voxels ((mod (roi ,2) == 1).* (roi > 0));
region2= voxels ((mod (roi ,2) == 0).* (roi > 0));
deviation = std (region ,[] ,3);
3 commentaires
Image Analyst
le 4 Août 2014
What about the File Exchange submission suggested in your duplicate post?
Réponses (0)
Voir également
Catégories
En savoir plus sur Read, Write, and Modify Image dans Help Center et File Exchange
Community Treasure Hunt
Find the treasures in MATLAB Central and discover how the community can help you!
Start Hunting!