How do you go about creating a file similar to lotka.xml that can be used for Stoichiometry matrices?
2 vues (au cours des 30 derniers jours)
Afficher commentaires plus anciens
If you have a file for a set of reactions, say a text file in the form
glyc3p[c] + h2o[c] -----> glyc[c] + pi[c]
atp[c] + glyc[c] -----> adp[c] + glyc3p[c] + h[c]
hcys-L[c] + ser-L[c] -----> cyst-L[c] + h2o[c]
aspsa[c] + h[c] + nadph[c] -----> hom-L[c] + nadp[c]
atp[c] + hom-L[c] -----> adp[c] + h[c] + phom[c]
How can this be converted into a file of the same form as lotka.xml that can be imported and turned into a stoichiometry matrix using commands m1 = sbmlimport('lotka.xml'); and [M,objSpecies,objReactions] = getstoichmatrix(m1) ?
0 commentaires
Réponses (0)
Voir également
Catégories
En savoir plus sur Other Formats dans Help Center et File Exchange
Community Treasure Hunt
Find the treasures in MATLAB Central and discover how the community can help you!
Start Hunting!