Help with ODE system inside lsqnonlin
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Gabriele Galli
le 25 Juin 2021
Commenté : Gabriele Galli
le 25 Juin 2021
Hi All,
I am getting the following error when simulating a system of ODE inside lsqnonlin:
I have two ICs and it looks to me that the function I passed to ODE45 has two outputs and not 0 as the error says.
Below how I coded it.
Any help would be greatly appreciated!
Thank you in advance, Gabri
Fast_first3=fast(1:15121,:);
Slow_first3=y2(1:3,:)
options = optimoptions(@lsqnonlin, 'Algorithm', 'levenberg-marquardt','Display','final-detailed')
lb=[]; ub=[];
tic
[k]=lsqnonlin(@(k) estimation(k,Fast_first3,Slow_first3), k0, lb, ub, options);
toc
function Err=estimation(k, Fast_first3, Slow_first3)
global s0 s1 delta Ks R0 r1 gamma Rinf V0 vs dw
%theta1_mine - r1 included
s0=k(1);
s1=k(2);
delta=k(3);
Ks=k(4);
R0=k(5);
r1=k(6);
gamma=k(7);
Rinf=k(8);
V0=k(9);
%Cycle A
tspanA_1 = linspace(0, (27.6-0.01), 27.6/0.01);
IC1_A=[10^-10 10^-10];
[t1_A, sol1_A] = ode45(@stateEqs1_A, tspanA_1, IC1_A);
P=Ks.*(s0+s1.*sol1_A(:,1).^delta).*dw.*sol1_A(:,2);
Ra=(Rinf-(Rinf-R0).*exp(-sol1_A(:,1)./V0)).*(1+r1.*(pi.*dw.*sol1_A(:,2)./vs).^gamma);
Dw=(2.*sol1_A(:,1))./(pi*dw);
%P(5061)=[]; P(10121)=[]; P(15181)=[]; %Remove last measurement in fast
Ra=[Ra(5061,:); Ra(10122,:); Ra(15183,:)];
Dw=[Dw(5061,:); Dw(10122,:); Dw(15183,:)];
E1=sqrt(inv(10^4)).*(Fast_first3-P);
E2=sqrt(inv(10^-4)).*(Slow_first3(:,1)-Ra);
E3=sqrt(inv(10^-4)).*(Slow_first3(:,3)-Dw);
Err=[E1; E2; E3];
function output = stateEqs1_A(t, X)
%global G1 g s0 s1 delta Ks R0 r1 gamma Rinf V0 vs dw ds0
u=.0106;
x1 = X(1) ;
x2 = X(2) ;
output=[pi*dw*x2;
(vs*(u-x2))/(dw*(s0+s1*x1^(delta)))];
end
end
2 commentaires
Jan
le 25 Juin 2021
sqrt(inv(10^-4)) ?! What about writing 100 instead of wasting time for INV and SQRT?
Remember that 10^-10 is an expensive power operation, while 1e-10 is a cheap constant.
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Jan
le 25 Juin 2021
It depends on what dw and the other global variables are.
Set a break point in this line:
output = [pi * dw * x2; ...
vs * (u - x2) / (dw * (s0 + s1 * x1^delta))];
and check the values of the variables.
Providing dw as global variable and then re-using it in a nested function is prone to bugs.
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