Dr. Soumya Banerjee
Harvard University
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https://sites.google.com/site/neelsoumya/ Professional Interests: Biocomputing, machine learning, bioinformatics, complex systems, mathematical modelling, big data, computational biology, biologically inspired computing, complex systems
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Feeds
A soumis
Samples from gamma and Wishart
Test and draw samples from a gamma distribution and a Wishart distribution
presque 7 ans il y a | 1 téléchargement |
A soumis
Generic function to perform logistic regression using elastic net regularization
Generic function to perform logistic regression using elastic net regularization
presque 8 ans il y a | 1 téléchargement |
A soumis
Example MATLAB script to plot ROC curve for different classification algorithms
Example MATLAB script to plot ROC curve and compute AUC for 4 different classification algorithms
presque 8 ans il y a | 3 téléchargements |
A soumis
A generic function that uses a Generalized Linear Model (GLM) with factors
A generic function that uses a Generalized Linear Model (GLM) with factors
environ 8 ans il y a | 1 téléchargement |
A soumis
Function to compute Fisher's p-value for meta-analysis
Function to compute Fisher's p-value for meta-analysis.
environ 8 ans il y a | 1 téléchargement |
A soumis
Generic function and example code for using neural networks
Generic function and example code for using neural networks for prediction.
plus de 8 ans il y a | 2 téléchargements |
A soumis
Generic example code and generic function for random forests
example code and generic function for random forests (checks out of bag errors and leaf size)
plus de 8 ans il y a | 1 téléchargement |
A soumis
Simple example and generic function for SVM binary classifier for general matrix
Simple generic function that takes two labelled classes and trains SVM classifier (general matrix).
plus de 8 ans il y a | 2 téléchargements |
A soumis
Simple example and generic function for SVM binary classifier
Simple generic function that takes two labelled classes and trains SVM classifier.
plus de 8 ans il y a | 1 téléchargement |
A soumis
Simple example code and generic function for random forests
Simple example code and generic function for random forests (checks out of bag errors)
environ 9 ans il y a | 4 téléchargements |
A soumis
Function to plot co-ordinates from a file on a map
Code to load co-ordinate data from a file and call function to plot co-ordinates on a map.
presque 10 ans il y a | 1 téléchargement |
A soumis
Generic function and example code for performing LASSO on GLM
Generic function and example code for performing LASSO on GLM and using it for prediction
plus de 10 ans il y a | 1 téléchargement |
A soumis
Generic function for LASSO on logistic regression
Generic function and example code for LASSO on logistic regression.
plus de 10 ans il y a | 1 téléchargement |
A soumis
Simple example and generic function to perform PCA
Simple example and generic function to perform PCA(principle components analysis)
plus de 10 ans il y a | 1 téléchargement |
A soumis
Example code and generic function to perform LASSO on GLM
Generic function to perform LASSO on generalized linear model (GLM).
plus de 10 ans il y a | 1 téléchargement |
A soumis
Function to perform Bayesian LASSO
Function to perform Bayesian LASSO (least absolute shrinkage and selection operator)
presque 11 ans il y a | 1 téléchargement |
A soumis
Simple MATLAB example code and generic function to perform LASSO
Simple MATLAB example code and generic function to perform LASSO
presque 11 ans il y a | 2 téléchargements |
A soumis
Bash script to compile MATLAB code in each directory
Iterative matlab compiler: this has Bash scripts to compile MATLAB code in each directory
environ 11 ans il y a | 1 téléchargement |
A soumis
Scripts to run MATLAB on cluster using bsub
This is a set of scripts to run MATLAB in batch mode on the cluster using bsub
environ 11 ans il y a | 1 téléchargement |
A soumis
Simple example and generic function for kmeans clustering
Simple generic function and example to perform kmeans clustering
environ 11 ans il y a | 1 téléchargement |
A soumis
Bayesian Linear Regression
This is a set of MATLAB functions to do Bayesian linear regression
environ 11 ans il y a | 4 téléchargements |
A soumis
Graphical User Interface for Solving Ordinary Differential Equations for In-Vitro Infection
A graphical user interface to solve a set of ordinary differential equations (in-vitro infection)
plus de 11 ans il y a | 1 téléchargement |
A soumis
Wilcoxon rank-sum test and box plots for genes/compounds etc in healthy vs. disease
Does a Wilcoxon rank-sum test and creates box plot for genes etc in healthy vs. disease individuals
plus de 11 ans il y a | 4 téléchargements |
A soumis
t-test and box plots for genes/compounds etc in healthy vs. disease
Does a t-test and creates box plots for genes/compounds in healthy vs. disease individuals
plus de 11 ans il y a | 1 téléchargement |
A soumis
healthy_disease_boxplot.zip
Box plots of measured quantity in healthy vs. disease in two cohorts
plus de 11 ans il y a | 1 téléchargement |
A soumis
Linear regression for multiple category data with different slopes for each
The function does OLS and RMA regression on data that is categorized into two different categories
plus de 11 ans il y a | 2 téléchargements |
A soumis
Linear regression with statistics for multiple category data
This function does linear regression with statistics for multiple category data (OLS and RMA)
environ 13 ans il y a | 1 téléchargement |
A soumis
A Graphical User Interface for Solving Delay Differential Equations and doing Local Search
A GUI for solving a set of delay differential equations (DDEs) and local search for best solutions
plus de 13 ans il y a | 4 téléchargements |
A soumis
Graphical User Interface for Solving Ordinary Differential Equations
A Graphical User Interface for Solving Ordinary Differential Equations (Immune Response Model)
presque 14 ans il y a | 1 téléchargement |
A soumis
Linear regression on log transformed data
A function that takes two column vectors and does linear regression on the data
environ 14 ans il y a | 1 téléchargement |
