Dr. Soumya Banerjee
Harvard University
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https://sites.google.com/site/neelsoumya/ Professional Interests: Biocomputing, machine learning, bioinformatics, complex systems, mathematical modelling, big data, computational biology, biologically inspired computing, complex systems
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Feeds
A soumis
Samples from gamma and Wishart
Test and draw samples from a gamma distribution and a Wishart distribution
plus de 7 ans il y a | 30 téléchargements |
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Generic function to perform logistic regression using elastic net regularization
Generic function to perform logistic regression using elastic net regularization
plus de 8 ans il y a | 111 téléchargements |
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Example MATLAB script to plot ROC curve for different classification algorithms
Example MATLAB script to plot ROC curve and compute AUC for 4 different classification algorithms
plus de 8 ans il y a | 1057 téléchargements |
A soumis
A generic function that uses a Generalized Linear Model (GLM) with factors
A generic function that uses a Generalized Linear Model (GLM) with factors
plus de 8 ans il y a | 25 téléchargements |
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Function to compute Fisher's p-value for meta-analysis
Function to compute Fisher's p-value for meta-analysis.
plus de 8 ans il y a | 287 téléchargements |
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Generic function and example code for using neural networks
Generic function and example code for using neural networks for prediction.
environ 9 ans il y a | 676 téléchargements |
A soumis
Generic example code and generic function for random forests
example code and generic function for random forests (checks out of bag errors and leaf size)
environ 9 ans il y a | 782 téléchargements |
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Simple example and generic function for SVM binary classifier for general matrix
Simple generic function that takes two labelled classes and trains SVM classifier (general matrix).
environ 9 ans il y a | 157 téléchargements |
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Simple example and generic function for SVM binary classifier
Simple generic function that takes two labelled classes and trains SVM classifier.
environ 9 ans il y a | 5126 téléchargements |
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Simple example code and generic function for random forests
Simple example code and generic function for random forests (checks out of bag errors)
presque 10 ans il y a | 3343 téléchargements |
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Function to plot co-ordinates from a file on a map
Code to load co-ordinate data from a file and call function to plot co-ordinates on a map.
plus de 10 ans il y a | 72 téléchargements |
A soumis
Generic function and example code for performing LASSO on GLM
Generic function and example code for performing LASSO on GLM and using it for prediction
environ 11 ans il y a | 232 téléchargements |
A soumis
Generic function for LASSO on logistic regression
Generic function and example code for LASSO on logistic regression.
environ 11 ans il y a | 311 téléchargements |
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Simple example and generic function to perform PCA
Simple example and generic function to perform PCA(principle components analysis)
environ 11 ans il y a | 607 téléchargements |
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Example code and generic function to perform LASSO on GLM
Generic function to perform LASSO on generalized linear model (GLM).
environ 11 ans il y a | 188 téléchargements |
A soumis
Function to perform Bayesian LASSO
Function to perform Bayesian LASSO (least absolute shrinkage and selection operator)
plus de 11 ans il y a | 550 téléchargements |
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Simple MATLAB example code and generic function to perform LASSO
Simple MATLAB example code and generic function to perform LASSO
plus de 11 ans il y a | 1160 téléchargements |
A soumis
Bash script to compile MATLAB code in each directory
Iterative matlab compiler: this has Bash scripts to compile MATLAB code in each directory
plus de 11 ans il y a | 157 téléchargements |
A soumis
Scripts to run MATLAB on cluster using bsub
This is a set of scripts to run MATLAB in batch mode on the cluster using bsub
plus de 11 ans il y a | 422 téléchargements |
A soumis
Simple example and generic function for kmeans clustering
Simple generic function and example to perform kmeans clustering
plus de 11 ans il y a | 1251 téléchargements |
A soumis
Bayesian Linear Regression
This is a set of MATLAB functions to do Bayesian linear regression
presque 12 ans il y a | 3271 téléchargements |
A soumis
Graphical User Interface for Solving Ordinary Differential Equations for In-Vitro Infection
A graphical user interface to solve a set of ordinary differential equations (in-vitro infection)
environ 12 ans il y a | 671 téléchargements |
A soumis
Wilcoxon rank-sum test and box plots for genes/compounds etc in healthy vs. disease
Does a Wilcoxon rank-sum test and creates box plot for genes etc in healthy vs. disease individuals
environ 12 ans il y a | 695 téléchargements |
A soumis
t-test and box plots for genes/compounds etc in healthy vs. disease
Does a t-test and creates box plots for genes/compounds in healthy vs. disease individuals
environ 12 ans il y a | 513 téléchargements |
A soumis
healthy_disease_boxplot.zip
Box plots of measured quantity in healthy vs. disease in two cohorts
environ 12 ans il y a | 417 téléchargements |
A soumis
Linear regression for multiple category data with different slopes for each
The function does OLS and RMA regression on data that is categorized into two different categories
environ 12 ans il y a | 821 téléchargements |
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Linear regression with statistics for multiple category data
This function does linear regression with statistics for multiple category data (OLS and RMA)
presque 14 ans il y a | 36055 téléchargements |
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A Graphical User Interface for Solving Delay Differential Equations and doing Local Search
A GUI for solving a set of delay differential equations (DDEs) and local search for best solutions
environ 14 ans il y a | 929 téléchargements |
A soumis
Graphical User Interface for Solving Ordinary Differential Equations
A Graphical User Interface for Solving Ordinary Differential Equations (Immune Response Model)
plus de 14 ans il y a | 983 téléchargements |
A soumis
Linear regression on log transformed data
A function that takes two column vectors and does linear regression on the data
plus de 14 ans il y a | 776 téléchargements |
