I have mass images that I want to extract the feret, circularity and area of but how do I know that's what is being counted?
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I managed to write this code. But what in the image is it measuring the properties from? like how can i confirm that it is measuring the area and number of the cells in the image?:
% read the image and convert to binary
im = imread('my_image.png');
bw = im2bw(im);
% remove small objects
bw = bwareaopen(bw, 50);
% fill the holes
bw = imfill(bw, 'holes');
% label the objects
cc = bwconncomp(bw);
labeled = labelmatrix(cc);
% extract region properties
props = regionprops(cc, 'Area', 'Perimeter', 'Centroid', 'Eccentricity', 'Circularity', 'MinorAxisLength', 'MajorAxisLength');
% loop over the objects
for i = 1:length(props)
% extract the properties for the i-th object
% display the properties
disp(['Object ', num2str(i), ':']);
disp(['Area = ', num2str(area)]);
disp(['Perimeter = ', num2str(perimeter)]);
disp(['Centroid = ', num2str(centroid)]);
disp(['Eccentricity = ', num2str(eccentricity)]);
disp(['Circularity = ', num2str(circularity)]);
disp(['Feret diameter = ', num2str(feret_diameter)]);
end
% display the labeled image
imshow(label2rgb(labeled))
Thanks,
L.
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Image Analyst
le 7 Mar 2023
You can display bw:
imshow(bw);
That will show you the blobs that are being measured.
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