Neuronal Model Speed _ Dynamic System vs SIMULINK vs ode23
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Hi all,
I built a small network of 5 neuron cells in MATLAB using ode23 as my differential equation solvers. I tried my best to optimize it so it runs roughly 17-20 seconds (I think there are roughly 100 equations in there, but I basically used as much vectorization as possible so that I wouldn't need to write each equation serialy).
But I have read that you can also do it with SIMULINK for a Hodgkin-Huxley model. I have never used SIMULINK before but I can try to learn that. But my question is: Does it run faster as a SIMULINK-component driven model or is using differential equations actually faster?
Another thing I found out was something called Dynamic System Modelling (https://www.mathworks.com/help/control/ug/dynamic-system-models.html) with transfer functions, feedbacks and stuff. This is another completely new thing to me. So I have 2 questions:
(1) Has anyone tried to recreate a Hodgkin-Huxley model in term of this concept? (2) Does this perform faster than ode23 and differential equations form?
Thank you!
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