If you haven't solve your problem yet , I may give you some clue about your problem. First of all; are you sure about the correctly installation about CCS and Control Suite ? Becuase in mode "Code Generation Pane" my toolchain is setted to TI CCS automatically. (I am using R2017b and CCS7)
In order to check the installation of necessaray programs, you can write "targetupdater" to command window. If you insatalled all the programs correctly, you should see a pane like this;
You don't need C2000 ware if you have controlSuite. I hope this will help. If problem continue; please inform us.