GECKO Toolbox

Version 3.2.4 (26,2 Mo) par Eduard Kerkhoven
Toolbox for including enzyme constraints in a genome-scale model.
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Mise à jour 3 sept. 2025
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Citation pour cette source

Eduard Kerkhoven (2026). GECKO Toolbox (https://github.com/SysBioChalmers/GECKO/releases/tag/v3.2.4), GitHub. Extrait(e) le .

Chen, Yu, et al. “Reconstruction, Simulation and Analysis of Enzyme-Constrained Metabolic Models Using GECKO Toolbox 3.0.” Nature Protocols, vol. 19, no. 3, Springer Science and Business Media LLC, Jan. 2024, pp. 629–67, doi:10.1038/s41596-023-00931-7.

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Compatibilité avec les versions de MATLAB
Créé avec R2022a
Compatible avec les versions R2019b et ultérieures
Plateformes compatibles
Windows macOS Linux
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src/geckomat/change_model

src/geckomat/gather_kcats

src/geckomat/get_enzyme_data

src/geckomat/kcat_sensitivity_analysis

src/geckomat/kcat_sensitivity_analysis/Bayesian

src/geckomat/limit_proteins

src/geckomat/model_adapter

src/geckomat/utilities

test/manual_tests

test/unit_tests

test/unit_tests/ecTestGEM

tutorials/full_ecModel

tutorials/full_ecModel/code

tutorials/light_ecModel

tutorials/light_ecModel/code

Version Publié le Notes de version
3.2.4

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.2.4
3.2.3

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.2.3
3.2.2

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.2.2
3.2.1

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.2.1
3.2.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.2.0
3.1.3

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.1.3
3.1.2.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.1.2
3.1.1.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.1.1
3.1.0.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.1.0
3.0.2.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.0.2
3.0.1

3.0.0.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v3.0.0
2.0.3.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v2.0.3
2.0.2.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v2.0.2
2.0.1.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v2.0.1
2.0.0.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v2.0.0
1.3.5.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.3.5
1.3.4.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.3.4
1.3.3.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.3.3
1.3.2.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.3.2
1.3.1.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.3.1
1.3.0.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.3.0
1.2.1.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.2.1
1.2.0.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.2.0
1.1.2.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.1.2
1.1.1.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.1.1
1.1.0.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.1.0
1.0.0.0

See release notes for this release on GitHub: https://github.com/SysBioChalmers/GECKO/releases/tag/v1.0
Pour consulter ou signaler des problèmes liés à ce module complémentaire GitHub, accédez au dépôt GitHub.
Pour consulter ou signaler des problèmes liés à ce module complémentaire GitHub, accédez au dépôt GitHub.