SPM NeuroSynth scraper
Lookup voxel activations with the neurosynth.org database
REQUIRED: SPM(only tested on 8) must be installed.
You can use this script in two ways:
1) Pass a filename of an analyze-format statmap, or
2) Estimate an SPM model and load it into the workspace with the "Results" button (in order to produce an xSPM structure)
The script will then scrape neurosynth.org for anatomical information associated with your activations.
%example 1A:
spm_mongo_neurosynth(xSPM); %loaded via the spm 8 results interface
%example 1B:
spm_mongo_neurosynth('my_statmap.hdr'); %note that img/nii also work
%example 2:
spm_mongo_neurosynth(xSPM,'savedata');
%example 3:
spm_mongo_neurosynth(xSPM,'savedata','search',1);
Citation pour cette source
Drew Linsley (2024). SPM NeuroSynth scraper (https://www.mathworks.com/matlabcentral/fileexchange/39017-spm-neurosynth-scraper), MATLAB Central File Exchange. Récupéré le .
Compatibilité avec les versions de MATLAB
Plateformes compatibles
Windows macOS LinuxCatégories
- Sciences > Neuroscience > Human Brain Mapping > MRI >
Tags
Remerciements
Inspiré par : cell2csv
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Version | Publié le | Notes de version | |
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1.13.0.0 | Bug Fix |
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1.12.0.0 | More bug fixes |
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1.8.0.0 | now accepts filenames of analyze-format statmaps |
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1.7.0.0 | Added a "searchlight" routine for finding information about activations. |
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1.6.0.0 | bug fix |
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1.5.0.0 | Fixed varargin error |
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1.4.0.0 | Added a routine to find data in the vicinity of coordinates that are not in the NeuroSynth database. |
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1.3.0.0 | Reformatted help section |
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1.0.0.0 |