WITio

A MATLAB data evaluation toolbox to script broader insights into big data from WITec microscopes

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Updated 17 Feb 2022

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WITio is intended for the users of WITec microscopes, who work with WITec Project/Data (*.wip/*.wid) files (v0-v7) and wish to enrich their data evaluation by customized automation scripts within MATLAB environment. Thanks to its fast bidirectional read/write capabilities, WITio bridges the best of both WITec software and MATLAB software. The toolbox is a great script-based automation platform for big data analysis and post-processing, which reduces a lot of slow error-prone manual work. This includes file batch processing, easily accessible customized tools and more systematic data evaluation. When combined with the WITec software's Autosaving feature, they can together even achieve powerful real time during-measurement task automation for industrial applications. To summarize, WITio aims to constantly open up new research and commercial possibilities to the WITec community by jointly keeping up with the ever-increasing big data for broader insights.
Associated code repository: https://gitlab.com/jtholmi/wit_io
Associated Code Ocean compute capsule (v2.0.1): https://doi.org/10.24433/CO.5319390.v1
See README and the associated publication to get started.
See CHANGELOG for full version history.
Begin contributing by reporting bugs and requesting features at the ISSUES page.

Cite As

Holmi, Joonas Tapani, and Harri Lipsanen. “WITio: A MATLAB Data Evaluation Toolbox to Script Broader Insights into Big Data from WITec Microscopes.” SoftwareX, vol. 18, Elsevier BV, June 2022, p. 101009, doi:10.1016/j.softx.2022.101009.

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MATLAB Release Compatibility
Created with R2014b
Compatible with R2011a and later releases
Platform Compatibility
Windows macOS Linux

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+WITio/+dev/+gitlab

+WITio/+dev/+tests

+WITio/+dev/+tools

+WITio/+fun

+WITio/+fun/+file

+WITio/+fun/+fit

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+WITio/+fun/+indep

+WITio/+fun/+java

+WITio/+fun/+misc

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+WITio/+fun/+visual

+WITio/+obj/@debug

+WITio/+obj/@handle_listener

+WITio/+obj/@handle_listener_event_data

+WITio/+obj/@wid

+WITio/+obj/@wip

+WITio/+obj/@wit

+WITio/+tbx

+WITio/+tbx/+path

+WITio/+tbx/+pref

+WITio/+tbx/+ui

third party

third party/bwdistsc2d

third party/export_fig

third party/fadf

third party/label

Version Published Release Notes
2.0.1

DOI to peer-reviewed SoftwareX publication. See v2.0.1 changelog in GitLab.

2.0.0

Foretaste into BREAKING MAJOR RELEASE before its yet-to-be-published peer-reviewed SoftwareX publication. See v2.0.0 changelog in GitLab.

1.4.0.1

Hotfix to file writing corruption.

1.4.0

See v1.4.0 changelog in GitLab.

1.3.2.1

See v1.3.2.1 changelog in GitLab.

1.3.2

See v1.3.2 changelog in GitLab.

1.3.1

See v1.3.1 changelog in GitLab.

1.3.0

See v1.3.0 changelog in GitLab.

1.2.3

See v1.2.3 changelog in GitLab.

1.2.2

Hotfix reported error on local disks. (Code was unintentionally only tuned to network disks.)

1.2.1

Hotfix to properly add paths upon toolbox installation by wit_io.mltbx.

1.2.0.1

Fix link to changelog.

1.2.0

See v1.2.0 changelog in GitLab.

1.1.2.1

Reupload to enable the toolbox installer.

1.1.2

Toolbox installer. Example 5: Unpatterning the Video Stitching image. Bug fixes. Code clean-up.

1.1.1

Polishing. Many bug fixes. More and simpler examples.

1.0.2

Added short usage guide in description.

1.0.1

Updated README.txt. Polished description. Added thumbnail.

1.0